Be sure to get at least 3.71 gears. Mine came with 3.21, and that is the only thing I am disappointed with in regards to my purchase. It is MUCH cheaper to get them up front than it would be to upgrade later.
The only way I was able to get the color coded top was to get the "Sahara" package. Even when I offered to pay the difference between the two hardtops, they told me it wasn't an option with any other trim level. And that was with me checking at several different dealers. But who knows, you might have better luck
I'll also be glad to answer any other questions you have.